Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000447165.1_202013-08-13] 36,360 sequences; 51,498,142 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq637 291 2e-76 >seq637 Length=5243 Score = 291 bits (322), Expect = 2e-76 Identities = 255/313 (81%), Gaps = 6/313 (2%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGC--CAGGCCCGCTTTGG-CGGGTCGCCGGCTTCT 76 || ||||||||||||||||||||||| |||| | || | || | ||||| Sbjct 4079 GAACGAGACCTTAACCTGCTAAATAGGATCAGGAACTTCGTGTTCTTGTATCA--CTTCT 4022 Query 77 TAGAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 135 |||||||||| | || || | | | ||||||||||||||||||||||||||||||||| Sbjct 4021 TAGAGGGACTTTGCGTGTCTAACGCAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 3962 Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTG 195 |||||||||||||||| |||||||||||||||||| | |||||||||| || |||||| Sbjct 3961 CTTAGATGTTCTGGGCTGCACGCGCGCTACACTGATGCATCCAACGAGTTTATAACCTTG 3902 Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 |||| |||||| ||||||||||| | | ||||| |||||||||| ||||||||| Sbjct 3901 GCCGATAGGTCTAGGTAATCTTGTGAGTATGCATCGTGATGGGGATAGATTATTGCAATT 3842 Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 ||| ||||||||||||||||||||||| |||| |||| |||| ||| ||||||||| Sbjct 3841 ATTAATCTTCAACGAGGAATGCCTAGTAGGCGCAAGTCAGCAGCTTGCGCCGATTACGTC 3782 Query 316 CCTGCCCTTTGTA 328 ||||||||||||| Sbjct 3781 CCTGCCCTTTGTA 3769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946855598080