Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000447165.1_202013-08-13] 36,360 sequences; 51,498,142 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq21181 80.6 9e-13 seq20158 77.0 1e-11 >seq21181 Length=1253 Score = 80.6 bits (88), Expect = 9e-13 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 407 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGT 466 ||||||||| |||||||| | || |||||||||||||| ||||||||||| || |||| Sbjct 828 TCGGAACTTTCCCGACAATGCATGTCGCTACCTTAGGACAGTTATAGTTACATCCACCGT 769 Query 467 TTACTGGGGCTT 478 ||||| | |||| Sbjct 768 TTACTAGAGCTT 757 >seq20158 Length=345 Score = 77.0 bits (84), Expect = 1e-11 Identities = 59/70 (84%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 397 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTA 456 ||||||||||||||| || || ||||| ||||||||||||| ||||| ||||||||| Sbjct 17 TTCGTGCAGGTCGGAGCTCACTCGACACTGAATTTCGCTACCGTAGGACTGTTATAGTTG 76 Query 457 CCACCGCCGT 466 | ||||||| Sbjct 77 CAGCCGCCGT 86 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701781007360