Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000447165.1_202013-08-13] 36,360 sequences; 51,498,142 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq35981 107 3e-21 >seq35981 Length=2866 Score = 107 bits (118), Expect = 3e-21 Identities = 95/118 (81%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | | | ||| ||||| ||||||| |||| || ||| Sbjct 2361 GTACGAGAGGAACAGTTGGGTC--GGATACTTGGTAAATGCGGCTAGCTGAAAAGCTAGT 2304 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||| ||||||||| | ||||||||| |||||||||||||||||||||||||||| Sbjct 2303 GCCGCGACGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 2246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818911447040