Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2017 237 3e-60 >seq2017 Length=8329 Score = 237 bits (262), Expect = 3e-60 Identities = 203/246 (83%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132 ||||||| |||||||||||||||||| | ||||| | || || |||||| ||||||| Sbjct 5440 TTTTACTGTGAAAAAATTAGAGTGTTTCAGGCAGGTTATAGCCCGGATACATCAGCATGG 5381 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 |||||| ||||||||| || | || ||||| |||||| | | | |||||||||| Sbjct 5380 AATAATGGAATAGGAC-TGAG--TCCATTTTATTGGTTATTGGATTTG--GTAATGATTA 5326 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||||| ||| ||||| | |||||| ||| ||||||||||||||||||||||||||| Sbjct 5325 ATAGGGACAGTTGGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTCTTGGATTTATTA 5266 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 | ||||||||| ||||||||| || |||| ||||||||||||||||| |||||||||| Sbjct 5265 AGGACTAACTAATGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACGAAAGT 5207 Query 313 TAGGGG 318 |||||| Sbjct 5206 TAGGGG 5201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915181540416