Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2017 224 4e-56 >seq2017 Length=8329 Score = 224 bits (248), Expect = 4e-56 Identities = 225/283 (80%), Gaps = 13/283 (5%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAA-C 466 ||||||||| |||||||||||||||||||| || || ||||||| ||||| ||| | Sbjct 3273 CCCGTCTTGAAACACGGACCAAGGAGTCTATCAATTAAGCGAGTGACAGGGTGGAAAAAC 3214 Query 467 CCGTGCGCGTAATGAAAGTGA--ACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCG 524 |||| ||| || |||||||| || ||||| |||| | |||||| |||| ||| Sbjct 3213 CCGTCCGCAAAACGAAAGTGAGTACA-AGGTGCCAACCGC--AAGGTGCAGCATCACCCG 3157 Query 525 ATCCTGATGTCTTCG----GATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 ||| | |||| || || |||| ||| |||||| || || | |||||||||||| Sbjct 3156 G-CCTCAAGTCTCCGACAAGA-GGATC-GAGGAAGAGCTTAATTGATAGGACCCGAAAGA 3100 Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 |||||||||| || |||||||||||||||||| ||||||||||||||| ||||| |||| Sbjct 3099 TGGTGAACTACGCTTGAATAGGGTGAAGCCAGGGGAAACTCTGGTGGAAGCTCGTAGCGA 3040 Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| |||||||||||| || ||||||||| Sbjct 3039 TACTGACGTGCAAATCGTTCGTCAAATTTGAGTGTAGGGGCGA 2997 Score = 172 bits (190), Expect = 2e-40 Identities = 139/167 (83%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 33 CTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAA 92 |||||| |||||| ||||||||||| |||||| |||| |||||| |||| |||||||||| Sbjct 3667 CTTCGAAGAGTCGGGTTGTTTGGGACTGCAGCCCTAAGTGGGAGATAAACTTCTTCTAAA 3608 Query 93 GCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152 |||||||||| | ||||||||||||| ||||||| | || ||||||||||||| || Sbjct 3607 GCTAAATATTCACGGGAGACCGATAGCGAACAAGTACTGCGAAGGAAAGATGAAAAGAAC 3548 Query 153 TTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||| |||||| ||||||| || ||||| ||||| | ||||||| Sbjct 3547 TTTGAAAAGAGGGTTAAAA--GACTTGAAACCGTTGAGAAGGAAGCG 3503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079956735350