Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2017 288 2e-75 >seq2017 Length=8329 Score = 288 bits (318), Expect = 2e-75 Identities = 214/247 (87%), Gaps = 10/247 (4%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || |||| ||||||||||||| || || |||| ||||||||||||||||||||||||| | Sbjct 4720 CATTGTAACGCGCGTGCGGCCGAGCACGTCTAGGGGCATCACAGACCTGTTATTGCCTTA 4779 Query 77 AACTTCCATTGGCTGGAA-GC-CAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTC 134 |||||||||||||| || || ||||||||||||||||||| || | || | || Sbjct 4780 AACTTCCATTGGCTTAAATGCACAATAGTCCCTCTAAGAAG-----TACAACCCGTTGTT 4834 Query 135 GATGG---GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 | | | ||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 4835 CACAGGTCGACTAGTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAAT 4894 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 4895 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCAAAGAATCAAGAAAGAGCTCTCA 4954 Query 252 ATCTGTC 258 ||||||| Sbjct 4955 ATCTGTC 4961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796784430777