Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2017 217 3e-54 >seq2017 Length=8329 Score = 217 bits (240), Expect = 3e-54 Identities = 243/317 (77%), Gaps = 16/317 (5%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGG----CGGGTCGCCGGCTTC 75 || ||||||||||||||||||| ||| | | || | || ||||| | |||| Sbjct 4870 GAACGAGACCTTAACCTGCTAACTAGTC--GACC--TGTGAACAACGGGTTGTA--CTTC 4817 Query 76 TTAGAGGGACTATCG-GC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 ||||||||||||| | || | ||||| |||||||||| ||||||||||||||||||||| Sbjct 4816 TTAGAGGGACTATTGTGCATTTAAGCCAATGGAAGTTTAAGGCAATAACAGGTCTGTGAT 4757 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 |||| |||| || || ||||||||||||| |||| || | | ||| ||| || || Sbjct 4756 GCCCCTAGACGTGCTCGGCCGCACGCGCGTTACAATGGCTGGCTCAAAAAGT--ATTTCC 4699 Query 193 TTGGCCGG-AAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 | | || ||||| |||||||||| |||| | |||||| | ||||||| | ||| Sbjct 4698 TGACCTGGAAAGGTTCGGGTAATCTTATTAATACCAGTCGTGTTAGGGATAGTTCTTTGA 4639 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 || ||| | |||| |||||||||| |||||||| || ||||||||| |||||||||| Sbjct 4638 AACTATAGATCTTGAACGAGGAATTTCTAGTAAGTGCAAGTCATCAGCTTGCGTTGATTA 4579 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||| |||||| Sbjct 4578 TGTCCCTGCCGTTTGTA 4562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947180894976