Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2017 111 3e-22 >seq2017 Length=8329 Score = 111 bits (122), Expect = 3e-22 Identities = 97/118 (82%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| ||| |||| |||||||| | ||| ||||||| || || | Sbjct 923 GTACGAGAGGAACCGTTAAAT-CAGA-TAATTGGTAAATACGGTTGTCTGAAAAGACAAT 866 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 |||| |||||||||||||| ||||||| ||||| ||||||||||||||||| |||| Sbjct 865 GCCGTGAAGCTACCATCTGTAAGATTATGACTGAAGGCCTCTAAGTCAGAATCTATGC 808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819183993088