Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2017 361 2e-97 >seq2017 Length=8329 Score = 361 bits (400), Expect = 2e-97 Identities = 364/466 (78%), Gaps = 14/466 (3%) Strand=Plus/Plus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| ||||||||||||||| | | |||||||||||||| || |||||||||| || Sbjct 5693 TATTTCTTGTCACTACCTCCCTGAATTAGGATTGGGTAATTTACGTCCCTGCTGCCTACC 5752 Query 103 T-TGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161 | | ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 5753 CGTAGGTGTAGTAGCCGTTTCTCAGGCTCCTTCTCCGGAATCGAACCCTAATTCTCCGTT 5812 Query 162 ACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTT 221 |||||| ||||||||| ||| || |||||||||| || |||||||||||||| || Sbjct 5813 ACCCGTGAGCGCCATGGTAGTCCAATACACTACCATCGAGAGCTGATAGGGCAGAAACTT 5872 Query 222 GAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGG 281 |||| ||||| | |||| | |||||||| | ||||| | ||||||| || Sbjct 5873 AGATGATTTATCGCAG---CAAGCC---GCGATTCGATCAGTTACTTTGAATCATCACAA 5926 Query 282 AGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCC---TTCCGAAGTCGGGGT 338 |||||||| ||||||| ||||||||||||||| || | | | ||| | Sbjct 5927 TCGCCCGAAGGAGATTGGTTTAATATCTAATAAATACAATCCGGTCGCGGGACACGGATT 5986 Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAA 398 |||| |||||||||||| | | ||||| | |||||||||||||| | | | ||||||| Sbjct 5987 TTTTCGCATGTATTAGCCCAACAATTAGCTCGGTTATCCATGTAATTTTGAATTATCAAA 6046 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 ||||| ||||||| ||||||||||||||||||||||| ||| | | | || | ||| Sbjct 6047 TAAACTATAACTGTTTTAATGAGCCATTCGCAGTTTCGCTG--TTCAATACTGA-ACTGG 6103 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||| ||||||||| ||||||||||||| |||||||| Sbjct 6104 CACATGCATGGGTTAATCTTTAAGACAAGCATATG-TAACTGGCAG 6148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510369535232