Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq3325 255 2e-65 >seq3325 Length=7495 Score = 255 bits (282), Expect = 2e-65 Identities = 236/294 (80%), Gaps = 9/294 (3%) Strand=Plus/Minus Query 393 AATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTG 452 ||||||| | | | ||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 2930 AATGGTTTTTACCCACCCGTCTTGAAACACGGACCAAGGAGTCTAACATATATGCGAGTG 2871 Query 453 TTTGGGTGTCAAACCCGTG-CGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGT 511 | ||| ||| | ||||||||||| |||| | || || | | | Sbjct 2870 TGCTAGTGGAAAAACTAACACGCGTAATGAAGGTGATTGA---TGCCAAGCGC--AAGCA 2816 Query 512 GCACCATCGACCGATCCTGATGTCTTCGG--ATGGATTTGAGTAAGAGCATAGCTGTTGG 569 ||| |||||||||| | |||| || ||| | | |||||||| ||||||| |||| | Sbjct 2815 GCAGCATCGACCGACCATGATC-CTCCGGTGAAAGGTTTGAGTATGAGCATACATGTTAG 2757 Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 2756 GACCCGAAAGATGGTGAACTATGCCTGAGTAGGGTGAAGCCAGGGGAAACTCTGGTGGAG 2697 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| |||||| ||| ||||||||||| |||||||| |||||||||||||||| Sbjct 2696 GCTCGTAGCGGTACTGACGTGCAAATCGTTCGTCAAACTTGGGTATAGGGGCGA 2643 Score = 154 bits (170), Expect = 6e-35 Identities = 133/164 (81%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||||| |||||| ||||||| | | |||||| |||| |||||| |||| ||||||||| | Sbjct 3324 TTCGAAGAGTCGGGTTGTTTTGTATTGCAGCCCTAAGTGGGAGATAAACTTCTTCTAAGG 3265 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||||| || |||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 3264 CTAAATATTTATGGGAAACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGAACT 3205 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 ||| ||||||||| |||| || |||||| ||||| | ||||| Sbjct 3204 TTGAAAAGAGAGTCAAAA--GACTTGAAATCGTTGAGAAGGAAG 3163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079541334650