Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq21362 158 3e-36 seq20087 158 3e-36 seq20084 158 3e-36 >seq21362 Length=18389 Score = 158 bits (174), Expect = 3e-36 Identities = 196/269 (73%), Gaps = 12/269 (4%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||| ||||| | ||||||||||| |||| ||||||||| | || ||||| Sbjct 4583 GCATTTTCACCTAAAATTCAATTTCACCGAGTTATAATTGGAGACAGTGAGGCAGTCGTT 4642 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||| | Sbjct 4643 ACGCCATTCATGCAGGACGGAACTTACCCGCCAAGGAATTTCGCTACCTTCGGACCGTCA 4702 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCAT- 191 ||||| |||||||||||| | | || || || || |||| || || Sbjct 4703 GGGTTACAGCCGCCGTTTACTGAGATTTAGACTAATAG----------GCTAGACCTATA 4752 Query 192 -CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 250 || | | | | |||| |||||||||||| || |||||| | || || || Sbjct 4753 GTTTTTTATCCTACAGCACTGGGCAGGCGTCAGACTCTATACATAATTATTAAATTTAGC 4812 Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCGC 279 ||||| ||||||||||| ||||||||||| Sbjct 4813 AGAGTCCTGTGTTTTTAGTAAACAGTCGC 4841 Score = 158 bits (174), Expect = 3e-36 Identities = 196/269 (73%), Gaps = 12/269 (4%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||| ||||| | ||||||||||| |||| ||||||||| | || ||||| Sbjct 9502 GCATTTTCACCTAAAATTCAATTTCACCGAGTTATAATTGGAGACAGTGAGGCAGTCGTT 9443 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||| | Sbjct 9442 ACGCCATTCATGCAGGACGGAACTTACCCGCCAAGGAATTTCGCTACCTTCGGACCGTCA 9383 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCAT- 191 ||||| |||||||||||| | | || || || || |||| || || Sbjct 9382 GGGTTACAGCCGCCGTTTACTGAGATTTAGACTAATAG----------GCTAGACCTATA 9333 Query 192 -CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 250 || | | | | |||| |||||||||||| || |||||| | || || || Sbjct 9332 GTTTTTTATCCTACAGCACTGGGCAGGCGTCAGACTCTATACATAATTATTAAATTTAGC 9273 Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCGC 279 ||||| ||||||||||| ||||||||||| Sbjct 9272 AGAGTCCTGTGTTTTTAGTAAACAGTCGC 9244 >seq20087 Length=24856 Score = 158 bits (174), Expect = 3e-36 Identities = 196/269 (73%), Gaps = 12/269 (4%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||| ||||| | ||||||||||| |||| ||||||||| | || ||||| Sbjct 4583 GCATTTTCACCTAAAATTCAATTTCACCGAGTTATAATTGGAGACAGTGAGGCAGTCGTT 4642 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||| | Sbjct 4643 ACGCCATTCATGCAGGACGGAACTTACCCGCCAAGGAATTTCGCTACCTTCGGACCGTCA 4702 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCAT- 191 ||||| |||||||||||| | | || || || || |||| || || Sbjct 4703 GGGTTACAGCCGCCGTTTACTGAGATTTAGACTAATAG----------GCTAGACCTATA 4752 Query 192 -CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 250 || | | | | |||| |||||||||||| || |||||| | || || || Sbjct 4753 GTTTTTTATCCTACAGCACTGGGCAGGCGTCAGACTCTATACATAATTATTAAATTTAGC 4812 Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCGC 279 ||||| ||||||||||| ||||||||||| Sbjct 4813 AGAGTCCTGTGTTTTTAGTAAACAGTCGC 4841 >seq20084 Length=29161 Score = 158 bits (174), Expect = 3e-36 Identities = 196/269 (73%), Gaps = 12/269 (4%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||| ||||| | ||||||||||| |||| ||||||||| | || ||||| Sbjct 8888 GCATTTTCACCTAAAATTCAATTTCACCGAGTTATAATTGGAGACAGTGAGGCAGTCGTT 8947 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||| | Sbjct 8948 ACGCCATTCATGCAGGACGGAACTTACCCGCCAAGGAATTTCGCTACCTTCGGACCGTCA 9007 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCAT- 191 ||||| |||||||||||| | | || || || || |||| || || Sbjct 9008 GGGTTACAGCCGCCGTTTACTGAGATTTAGACTAATAG----------GCTAGACCTATA 9057 Query 192 -CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 250 || | | | | |||| |||||||||||| || |||||| | || || || Sbjct 9058 GTTTTTTATCCTACAGCACTGGGCAGGCGTCAGACTCTATACATAATTATTAAATTTAGC 9117 Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCGC 279 ||||| ||||||||||| ||||||||||| Sbjct 9118 AGAGTCCTGTGTTTTTAGTAAACAGTCGC 9146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260530403136