Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq21362 120 1e-24 seq20087 120 1e-24 seq20084 120 1e-24 >seq21362 Length=18389 Score = 120 bits (132), Expect = 1e-24 Identities = 103/125 (82%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 349 CAATTTCACCGGGCCTGTGGTTG-AGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGT 407 ||||||||||| | | | ||| |||||| || |||||||||||||||| |||||| Sbjct 4601 CAATTTCACCGAGT-TATAATTGGAGACAGTGAGGCAGTCGTTACGCCATTCATGCAGGA 4659 Query 408 CGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTT 467 ||||||||||||| ||||||||||||||||||| ||| || | ||||| |||||||| Sbjct 4660 CGGAACTTACCCGCCAAGGAATTTCGCTACCTTCGGACCGTCAGGGTTACAGCCGCCGTT 4719 Query 468 TACTG 472 ||||| Sbjct 4720 TACTG 4724 Score = 120 bits (132), Expect = 1e-24 Identities = 103/125 (82%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 349 CAATTTCACCGGGCCTGTGGTTG-AGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGT 407 ||||||||||| | | | ||| |||||| || |||||||||||||||| |||||| Sbjct 9484 CAATTTCACCGAGT-TATAATTGGAGACAGTGAGGCAGTCGTTACGCCATTCATGCAGGA 9426 Query 408 CGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTT 467 ||||||||||||| ||||||||||||||||||| ||| || | ||||| |||||||| Sbjct 9425 CGGAACTTACCCGCCAAGGAATTTCGCTACCTTCGGACCGTCAGGGTTACAGCCGCCGTT 9366 Query 468 TACTG 472 ||||| Sbjct 9365 TACTG 9361 >seq20087 Length=24856 Score = 120 bits (132), Expect = 1e-24 Identities = 103/125 (82%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 349 CAATTTCACCGGGCCTGTGGTTG-AGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGT 407 ||||||||||| | | | ||| |||||| || |||||||||||||||| |||||| Sbjct 4601 CAATTTCACCGAGT-TATAATTGGAGACAGTGAGGCAGTCGTTACGCCATTCATGCAGGA 4659 Query 408 CGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTT 467 ||||||||||||| ||||||||||||||||||| ||| || | ||||| |||||||| Sbjct 4660 CGGAACTTACCCGCCAAGGAATTTCGCTACCTTCGGACCGTCAGGGTTACAGCCGCCGTT 4719 Query 468 TACTG 472 ||||| Sbjct 4720 TACTG 4724 >seq20084 Length=29161 Score = 120 bits (132), Expect = 1e-24 Identities = 103/125 (82%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 349 CAATTTCACCGGGCCTGTGGTTG-AGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGT 407 ||||||||||| | | | ||| |||||| || |||||||||||||||| |||||| Sbjct 8906 CAATTTCACCGAGT-TATAATTGGAGACAGTGAGGCAGTCGTTACGCCATTCATGCAGGA 8964 Query 408 CGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTT 467 ||||||||||||| ||||||||||||||||||| ||| || | ||||| |||||||| Sbjct 8965 CGGAACTTACCCGCCAAGGAATTTCGCTACCTTCGGACCGTCAGGGTTACAGCCGCCGTT 9024 Query 468 TACTG 472 ||||| Sbjct 9025 TACTG 9029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702035975808