Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq56276 167 4e-39 >seq56276 Length=3252 Score = 167 bits (184), Expect = 4e-39 Identities = 193/254 (76%), Gaps = 26/254 (10%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||| || ||||||| ||||||||||||||| ||| Sbjct 2017 GTACAAAGGGCAGGGACGTAATCAACGCGGGC-TGATGACCCGCGCTTACTAGGAA-TTC 2074 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGAT--GAAATTTCAAAGAT 118 | | || |||| | | |||| ||| ||||||||| || |||||| | | ||| ||||| Sbjct 2075 CACCTTCAAGATCCATAATTTCAACGATCTATCCGCAGCACGATACGTATTTTAGAAGAT 2134 Query 119 T------------ACCCGGACC--TGTCG--GCCAAGGTG-ATAGA----CTCGTTGAAT 157 | | |||| | |||| || || ||| | || |||| | Sbjct 2135 TTAGCTGTGTCTATCTCGGAGCAGCGTCGATGCATGAATGCATATACCCCCTTGTTGTAC 2194 Query 158 ACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2195 GTATCAGTGTAGCACGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGC 2254 Query 218 CTCAAACTTCCGTG 231 ||| ||||||| || Sbjct 2255 CTC-AACTTCCTTG 2267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751587763705