Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq56276 203 1e-49 >seq56276 Length=3252 Score = 203 bits (224), Expect = 1e-49 Identities = 222/287 (77%), Gaps = 15/287 (5%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-- 462 || ||||||||| |||||||||||||||||||||||| ||||||| | | | ||||| Sbjct 792 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATATATGCGATTATGTTGGTGTTGT 733 Query 463 -AAACC---CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCAT 518 ||||| | || || ||||||||| | ||| || |||| || ||| |||| ||| Sbjct 732 TAAACCATACATGAGC--AATGAAAGTAAGCGG---TGCCAACC-GTAAGG-TGCAGCAT 680 Query 519 CGACCGATCCTGATG-TCTTCGGATGGATT-TGAGTAAGAGCATAGCTGTTGGGACCCGA 576 || || | |||| ||| || | | || | ||||||| ||||| |||||||| Sbjct 679 CGGCCAGTTGTGATCCTCTGGAGAAGCGTACTGGCTGTGAGCATATCTGTTAGGACCCGA 620 Query 577 AAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCA 636 |||||||||||||| || || |||||||||||||| ||||||||| ||||| || || | Sbjct 619 AAGATGGTGAACTACGCTTGGGTAGGGTGAAGCCAGGGGAAACTCTTGTGGAAGCCCGAA 560 Query 637 GCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||| ||||||||||| |||||||| ||| || ||||||||| Sbjct 559 GCGGTACTGACGTGCAAATCGTTCGTCAAACTTGAGTGTAGGGGCGA 513 Score = 113 bits (124), Expect = 2e-22 Identities = 92/112 (82%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 37 GACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTA 96 || ||||||||||||| |||| ||||||||||| ||||||||| | |||| |||| ||| Sbjct 1158 GAAGAGTCGAGTTGTTCGGGACTGCAGCTCTAAGTGGGAGGTAGACTTCTCCTAAGGCTC 1099 Query 97 AATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 148 |||| |||||||||||||| ||||||| |||| |||||||||||| Sbjct 1098 AATAACTATGAGAGACCGATAGCGAACAAGTAATGTGAATGAAAGATGAAAA 1047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078786208850