Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq7706 100 1e-18 seq50985 80.6 1e-12 >seq7706 Length=408 Score = 100 bits (110), Expect = 1e-18 Identities = 167/238 (70%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 || |||||||| |||| | |||||||| | | ||| | | |||| | |||| Sbjct 173 TCCACTACGGACCTTAG-CACCCGCAGTGTGTCTCCCGTGATTGAACTTGATCGTATTCT 231 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGG--CCCCCTAGACCATCCAGTGCTCTACCTC 118 ||||||| | |||||||| | || |||||||| | | ||||||| |||| | Sbjct 232 GAGTTTGCATCGAGTCGGTAAGGTCGTAAAACCCCCCTAGTCGAAACAGTGCTTTACC-C 290 Query 119 CGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAA 178 | || | || ||| || |||||||| ||||||||||||||||||||| | Sbjct 291 CAATCAGTTATACACGAGGCACTACCTAAATAGTTTTCGGGGAGAACCAGCTATCTCCGT 350 Query 179 GTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTG 236 | |||||| ||||||||| || ||||||| ||||||| | | ||| |||| | |||| Sbjct 351 GCTTGATTAGCCTTTCACTCCGATCCACAACTCATCCCGTAATTTTGCAACATTAGTG 408 >seq50985 Length=8895 Score = 80.6 bits (88), Expect = 1e-12 Identities = 80/104 (77%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 142 ACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTA 201 || ||||| |||||| ||||||| ||||||||| || ||||||||||||||||||||| Sbjct 5854 ACTTAAATACATTTCACGGAGAACTAGCTATCACTAACCTTGATTGGCCTTTCACCCCTA 5795 Query 202 TCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTC 245 | | ||||||| | ||| |||| | |||||||||| Sbjct 5794 ATAATAAATCATCCCAGGATTTTGCAACATCCACGGGTTCGGTC 5751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1816571474688