Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq47411 224 3e-56 >seq47411 Length=283 Score = 224 bits (248), Expect = 3e-56 Identities = 188/230 (82%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 151 GGATAGA----CCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACG 206 ||||||| || |||| |||||||| |||||| ||||| ||| ||||||||| || Sbjct 246 GGATAGATGAGCCTGCGTTAGATTAGCTTGTTGGTGGGGTAAAGGCCTACCAAGGCTGCG 187 Query 207 ATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTC 266 ||| |||| || ||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 186 ATCTATAGCTGATTTGAGAGGATGATCAGCCACATTGGAACTGAGACACGGTCCAAACTC 127 Query 267 CTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCC 326 |||||||||||||||||||||||||||| ||||||||| ||||||||| |||||| || Sbjct 126 CTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGGAAGCCTGATCCAGCAATACC 67 Query 327 GCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA 376 ||| | || |||||| | |||| ||||||| || | ||| ||| || Sbjct 66 ATGTGTGTGAAGAAGGCTCTAGGGTTGTAAAGCACTTTAGTCAGGGAGGA 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1496752553088