Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq7706 266 1e-68 >seq7706 Length=408 Score = 266 bits (294), Expect = 1e-68 Identities = 290/379 (77%), Gaps = 6/379 (2%) Strand=Plus/Minus Query 104 CACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTT 163 ||||||||||| ||||||| |||||||| ||||| | || |||||||||||| ||| | Sbjct 408 CACTAATGTTGCAAAATTACGGGATGAGTTGTGGATCGGAGTGAAAGGCTAATCAAGCAC 349 Query 164 GGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGG 223 ||| ||||||||||||| ||||||||||||||||||||||||| |||| || ||| Sbjct 348 GGAGATAGCTGGTTCTCCCCGAAAACTATTTAGGTAGTGCCTCGTGTATAACTGATTGGG 289 Query 224 GTAGAGCACTGTTATGGCTAGGGGGTCATTGCGA-CTTACCAAACCATTGCAAACTCCGA 282 ||| ||||||||| | |||||||| || ||| |||||| | | ||||||||| || Sbjct 288 GTAAAGCACTGTTTCGACTAGGGGGGTTTTACGACCTTACCGACTCGATGCAAACTCAGA 229 Query 283 ATGCGCATC-AGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAG 341 || || ||| |||| | | |||||| | |||||||||||||||| ||||| Sbjct 228 ATACG-ATCAAGTTCAATCACGGGAGACACACTGCGGGTGCTAAGGTCCGTAGTGGAGAG 170 Query 342 GAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAG 401 | || | || ||| || |||||| ||| || | | |||||||| | ||||||| Sbjct 169 GGAAACAGCCCAGACCGCCAACTAAGGTCCCCAAGTCATAGCTAAGTGGGA--AACGAAG 112 Query 402 TCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCG 461 | || || ||||||| |||| |||||||| |||||||||| || |||||||| ||| Sbjct 111 TGGGAAGGCCCAGACAGCCAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCG 53 Query 462 TAACAGCTCACTAGTCGAG 480 ||| |||||||| |||||| Sbjct 52 TAATAGCTCACTGGTCGAG 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1688643906048