Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq11536 132 4e-26 seq29984 114 1e-20 seq17286 100 2e-16 >seq11536 Length=1331 Score = 132 bits (146), Expect = 4e-26 Identities = 564/875 (64%), Gaps = 41/875 (5%) Strand=Plus/Minus Query 61057 TTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCT 61116 ||||| ||||||| ||| |||| ||||| | ||| |||||||| ||| | ||||| Sbjct 1005 TTCGTCCTGTTCCCAATCCAGTACAAGGATGTCTGGGAGATGTACAAGAAGCAGCAAGCT 946 Query 61117 TCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGC----G 61172 | ||||||| || |||||| |||| | | |||| | || |||||| | | Sbjct 945 TGCTTCTGGGTAGTCGAGGAGATCGACCTTGCATCAGACCTCAAAGACTGGAATGACAAG 886 Query 61173 TTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGA 61232 | | || | |||| ||| |||||||| | || | || |||||||| ||||| || Sbjct 885 CTCAATGAT-GATGAAAGACACTTCATTAAGTACGTTCTTGCCTTCTTTGCTGCTTCAGA 827 Query 61233 CGGTATCGTCAATGAGAA-TTTATTG-GAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAG 61290 |||||||||| ||||| || |||| |||| ||||| || || ||||| | || Sbjct 826 CGGTATCGTCCTCGAGAACTTGATTGAGAAC--TTCGCTTCTGAAGTCCAAGTACCAGAA 769 Query 61291 GCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGT 61350 | | | || |||||||| ||||| | | |||||||| |||| |||| ||| Sbjct 768 GTGAGATGCTTCTACGGATTCCAAAGTATGATGGAGAACATCCATAGTGAGACCTACTCC 709 Query 61351 GTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGAT----TGTTCAATGC 61406 | || || ||||| || || || || || | | | ||| ||| | ||||| || Sbjct 708 CTCCTGATTGATACCTATATTAGTGA-CGAAC---AAGAGAAAGATTTCCTCTTCAAAGC 653 Query 61407 CATCGAGA----CGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCA 61462 || || | |||||| || || ||| || || ||||| | || ||||||| Sbjct 652 TATTGAAAATATTGATACC----GTCAAAAAGAAGGCTGAATGGGCTATTAAATGGATCA 597 Query 61463 CCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTAT 61522 || | | | | || || | |||| | | | || ||||| ||||| || | | Sbjct 596 ACA--AGAGC-GATAGCTTCGCTGAAAGGCTCATCGCCTTTGCCTGTGTCGAAGGAATCT 540 Query 61523 TTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTT--ATGCCCGG 61580 ||||| ||||| ||| ||||||||||||| | | ||| | | ||| ||||| || Sbjct 539 TTTTCTCCGGATCATTTTGCGCAATCTTTTGGCTCA--AAAAGAGATCTTTGATGCCAGG 482 Query 61581 TCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGT 61640 || |||| || || ||||| || | || || || | || |||||| ||| Sbjct 481 ACTTTGCTTCTCTAACGAATTGATCTCTAGAGATGAAGGACTTCACACTGATTTCGCTTG 422 Query 61641 TTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGT 61700 ||||| | ||| | | |||| || ||| | ||| | | ||||| | Sbjct 421 CTTGCTTTACAAGC---ACATGGTAAACAAGGTGTCTAACGAGAGGATCTACGAGATCAT 365 Query 61701 TCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCAT 61760 || || || | |||||||| ||||| | |||| | || || ||| |||||| Sbjct 364 GTCAGAAGCTGTTGCGATCGAACACGAATTCGTATCTGAGTCCTTACCAGTCGAACTCAT 305 Query 61761 CGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGT 61820 ||||||||| || ||| ||| || || ||||| || || || ||| | || | | Sbjct 304 CGGCATGAACAGTAAACTTATGAGCCAATACATTGAGTTCGTAGCAGACAGACTCTGATT 245 Query 61821 C-GATTTGGGTATGAAGCGGATCTATAATACGAAA--AACCCATTTGATTTCATGGACAT 61877 | | |||| || | | ||||| | | || || ||||| || | ||||| || Sbjct 244 CACACTTGG---TGCCCCCAAACTATACAATGTAAGTAATCCATTCGAGTGGATGGATAT 188 Query 61878 GATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912 ||| || || | || ||||| || || ||||||| Sbjct 187 GATCTCTCTCCAAGGGAAGACTAACTTCTTCGAGA 153 >seq29984 Length=2719 Score = 114 bits (126), Expect = 1e-20 Identities = 369/567 (65%), Gaps = 18/567 (3%) Strand=Plus/Minus Query 66010 AAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGT 66069 || |||||| |||||||||||||||| | || | | ||||| || | || || Sbjct 1525 AATAGATGCCAGGTTGCAGACAGCTACTTGATCTTTATCAGTATATTCCATAACCTCACA 1466 Query 66070 GCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTAC---TCTTGCGATTGCA 66126 ||| ||||| || || || || | ||||||||||||| ||||| | ||| Sbjct 1465 GCAAAGATTCGAGCTTTTGATAGTTCCAAGATTCTGTTGATTAGATTTCTTGT--TGGCA 1408 Query 66127 TGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTG 66186 | ||||| || | |||||| ||| || ||||||| ||||| ||||| || || | Sbjct 1407 -GAGTCCTTATAGAGCATGTATGGAACCCCTGTCTCAATCTGGGATTCAATAATAGCATT 1349 Query 66187 CCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATG----TT 66242 ||||||| | ||||| | || | | ||||||| ||| | | || Sbjct 1348 CCAAAGATGCTGCGCCTTGATTGTTTT------CTTTCCTTTGCCTTCTTGCTCATATTT 1295 Query 66243 CGTAGAG-GTGTT-CGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300 ||| | ||||| |||| ||||||||| ||| ||| | |||||| | || ||| Sbjct 1294 AGTATAAAGTGTTTCGAATTCTTCACCCCAGCATTCAAACAATCCTGGACATTGGTTTGG 1235 Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360 ||| | || | ||| |||||||| | || || | ||| || | |||| | ||| Sbjct 1234 ACAAAAGAGGGTCCAGTCACCATCTTCCTCAACTCTCTTCATGAACAAATCACAGACCCA 1175 Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTC 66420 || || ||||| | || | ||||| | || || | || || || || || Sbjct 1174 AAGAGCATAGAACAAGTCTCTTGCTCTGTTTTCTTCTTTACCATGGTTCTTCTTTAAACT 1115 Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480 | |||||| ||||||| || ||||| ||||| || |||| ||| || | || | | Sbjct 1114 CAAAAACTCATAGATGTCTGCGTGCCAAGGTTCGAGATAGACGGCAAAAGCTCCTTTTCT 1055 Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540 || || || ||||||||||| || | ||| ||||| |||| | | ||| || || Sbjct 1054 CTTACCACCTCCTTGGTCGACATATCTAGCAGTGTTGTTATAGACCCTGAGCATTGGGAC 995 Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCC 66567 | || ||||| | ||||| ||||| Sbjct 994 TACTCCATTAGAGATTCCATTAGTGCC 968 >seq17286 Length=2746 Score = 100 bits (110), Expect = 2e-16 Identities = 488/774 (63%), Gaps = 2/774 (0%) Strand=Plus/Minus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 |||||| | | | || || |||||| || || || ||||| | || || | | || Sbjct 1542 ACAAACCTTGCCAAGGAAATAGATGCAAGATTACAAACAGCAACCTGATCCTTATCTGTG 1483 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 || || | |||||| ||| || || || || || || | ||| || || ||| Sbjct 1482 TATTCCATAATTTCACAGCAGAGGTTTGAGCTCTTGATAGTTCCAAGATTTTGCTGGTTA 1423 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 || | |||| | || || || | |||||| || |||||||| | ||||| Sbjct 1422 GATTTCCTATTGGCAGAGTCTTTATAGAGCATGTATGGGACACCGGTCTCGATCTGGGAT 1363 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT 66232 ||||| || |||| ||| || | ||||| || || || | |||||| | Sbjct 1362 TCAATAATTGCGTTCCAGAGGTGTTGAGCCTTTACAGTCTTGACTCCTTTACCTTCTTCT 1303 Query 66233 TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACAC 66292 || || || || | | ||| || ||| ||||| ||| ||| | || ||| Sbjct 1302 TCATATTGAGTATACAATTTTTCAAATTCTTCTCCCCAACTTTCAAACAATCCAGGGCAC 1243 Query 66293 TTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCA 66352 | | ||||| | || | ||| | ||||||| ||| || | ||| || || || Sbjct 1242 TCATTCGGACAGAAGAGGGTCCAGTTGCCATCCTCTTCAACTCTCTTCATGAACAGGTCT 1183 Query 66353 GGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTG 66412 | ||| | |||||||| | || | ||||| | || || | || || || || Sbjct 1182 CAGACCCACATAGCGTAGAACAAGTCTCTTGCTCTGTTTTCATCTTTACCATGGTTCTTT 1123 Query 66413 CGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAG 66472 | || | ||||||| |||| || |||||||||||||| || ||||||||||| | | Sbjct 1122 TTGAGGTTCAAGAACTCATAGATATCTGCATGCCATGGTTCGAGATAGATGGCGAAGGCG 1063 Query 66473 CCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAAC 66532 || | | || ||||| |||||||| || || | || || |||||||| || | | Sbjct 1062 CCTTTTCTCTTACCGCCTCCTTGGTCAACATATCTTGCAGTATCATTGAAGACTCGAAGC 1003 Query 66533 ATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCG 66591 || || || | || ||||| || ||||| || ||| || | || | | Sbjct 1002 ATGGGCACCAATCCATTAGAACGTCCGTTGGTTCCTCTAATGTAAGA-ATTGGTCGATCT 944 Query 66592 TATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC 66651 || ||||||| || |||||||| ||||| |||| ||||| |||||| | Sbjct 943 GATGCAGTGAACAGCAAGTCCAATACCTCCGGCATTCTTAGAGATAATAGCACATTGCTT 884 Query 66652 CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACT 66711 || ||| | || || || || || ||| || || | || | | |||| ||||| Sbjct 883 CAATGTGTCATAGATTCCATCTATAGAATCATCCCGCATTGCGAGCAAGAAGCAAGAACT 824 Query 66712 AAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAA 66765 | ||| ||||| || || | | ||| | ||| || ||||| || || || Sbjct 823 CATTTGTGGTTTTGGAGTTCCTGAGTTGAACAAGGTAGGAGTAGCATGGGTGAA 770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397293815613680