Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000295675.1_202012-09-07] 22,363 sequences; 67,158,112 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq21323 210 3e-52 seq20474 210 3e-52 >seq21323 Length=7606 Score = 210 bits (232), Expect = 3e-52 Identities = 191/233 (82%), Gaps = 7/233 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| ||| |||| |||||| |||||||||||||||| | Sbjct 3387 GTACAAAGGGCAGGGACTTAATCAGCGCAAGCTA-ATGACTTGCGCTTACTAGGAATT-C 3330 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 |||||| |||| | | |||| ||| |||||||||||||||||| | | ||| | |||| Sbjct 3329 CTCGTTCAAGATCTATAATTCCAAAGATCTATCCCCATCACGACGCATATTGCT--GATT 3272 Query 120 ACCCGGA-CCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||| | ||| ||| || || ||||| || || | |||||||||| ||||||| Sbjct 3271 ACCAGCTGCCTCACGGAGCTGG-GAAGTACTCGCTGTATGCGTCAGTGTAGCACGCGTGC 3213 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct 3212 GGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 3160 >seq20474 Length=5625 Score = 210 bits (232), Expect = 3e-52 Identities = 191/233 (82%), Gaps = 7/233 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| ||| |||| |||||| |||||||||||||||| | Sbjct 4220 GTACAAAGGGCAGGGACTTAATCAGCGCAAGCTA-ATGACTTGCGCTTACTAGGAATT-C 4277 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 |||||| |||| | | |||| ||| |||||||||||||||||| | | ||| | |||| Sbjct 4278 CTCGTTCAAGATCTATAATTCCAAAGATCTATCCCCATCACGACGCATATTGCT--GATT 4335 Query 120 ACCCGGA-CCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||| | ||| ||| || || ||||| || || | |||||||||| ||||||| Sbjct 4336 ACCAGCTGCCTCACGGAGCTGG-GAAGTACTCGCTGTATGCGTCAGTGTAGCACGCGTGC 4394 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct 4395 GGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 4447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751837085545