Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000295675.1_202012-09-07] 22,363 sequences; 67,158,112 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq20474 122 5e-26 seq21323 93.3 2e-17 >seq20474 Length=5625 Score = 122 bits (134), Expect = 5e-26 Identities = 100/120 (83%), Gaps = 10/120 (8%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACAT-CGCC 59 ||||||||||||||||||||||| ||||||||||| | | ||||| |||| Sbjct 4745 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGAAGGCG-------GATAAGGCGCGCC 4797 Query 60 --CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || Sbjct 4798 TCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTAGGACGGTATCTGATCGTCTTTGA 4857 >seq21323 Length=7606 Score = 93.3 bits (102), Expect = 2e-17 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || Sbjct 2808 CCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTAGGACGGTATCTGATCGTCTTTGA 2750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278341632570