Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000295675.1_202012-09-07] 22,363 sequences; 67,158,112 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq21323 266 6e-69 seq20474 266 6e-69 >seq21323 Length=7606 Score = 266 bits (294), Expect = 6e-69 Identities = 208/246 (85%), Gaps = 3/246 (1%) Strand=Plus/Plus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132 |||||| |||| ||||||||||||||| | |||||| || |||||||||||||||| Sbjct 2506 TTTTACCTTGAGAAAATTAGAGTGTTCCAGGCAGGCTCGCGCCGGAATACATTAGCATGG 2565 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 |||||||||||||||| | | ||| ||||||||||| |||| | |||||||||| Sbjct 2566 AATAATAGAATAGGACTTTAG--TCTCCTTTGTTGGTTTGAGGGACTGAAGTAATGATTA 2623 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||||||||| ||||| | |||||| ||||||||||||||||||||| |||||| || Sbjct 2624 ATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTCGGATTTGTTA 2683 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 |||||||||| ||||||||| || |||||||||||||||||||||| |||||||||| Sbjct 2684 AAGACTAACTTATGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGT 2742 Query 313 TAGGGG 318 |||||| Sbjct 2743 TAGGGG 2748 >seq20474 Length=5625 Score = 266 bits (294), Expect = 6e-69 Identities = 208/246 (85%), Gaps = 3/246 (1%) Strand=Plus/Minus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132 |||||| |||| ||||||||||||||| | |||||| || |||||||||||||||| Sbjct 5101 TTTTACCTTGAGAAAATTAGAGTGTTCCAGGCAGGCTCGCGCCGGAATACATTAGCATGG 5042 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 |||||||||||||||| | | ||| ||||||||||| |||| | |||||||||| Sbjct 5041 AATAATAGAATAGGACTTTAG--TCTCCTTTGTTGGTTTGAGGGACTGAAGTAATGATTA 4984 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||||||||| ||||| | |||||| ||||||||||||||||||||| |||||| || Sbjct 4983 ATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTCGGATTTGTTA 4924 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 |||||||||| ||||||||| || |||||||||||||||||||||| |||||||||| Sbjct 4923 AAGACTAACTTATGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGT 4865 Query 313 TAGGGG 318 |||||| Sbjct 4864 TAGGGG 4859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914995333824