Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000295675.1_202012-09-07] 22,363 sequences; 67,158,112 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq21323 71.6 8e-11 seq20474 71.6 8e-11 >seq21323 Length=7606 Score = 71.6 bits (78), Expect = 8e-11 Identities = 52/58 (90%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||| | ||||||||||| ||||||||||||||||||| |||| || |||||||| Sbjct 3410 TCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACTTAAT-CAGCGCAAGCT 3355 >seq20474 Length=5625 Score = 71.6 bits (78), Expect = 8e-11 Identities = 52/58 (90%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||| | ||||||||||| ||||||||||||||||||| |||| || |||||||| Sbjct 4197 TCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACTTAAT-CAGCGCAAGCT 4252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300736936340