Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000295675.1_202012-09-07] 22,363 sequences; 67,158,112 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq21323 152 5e-35 seq20474 152 5e-35 >seq21323 Length=7606 Score = 152 bits (168), Expect = 5e-35 Identities = 143/180 (79%), Gaps = 3/180 (2%) Strand=Plus/Plus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGG 71 |||||| |||| |||||||||| |||| | |||||| || |||||||||| ||||| Sbjct 2506 TTTTACCTTGAGAAAATTAGAGTGTTCCAGGCAGGCTCGCGCCGGAATACATTAGCATGG 2565 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||||||||||||| | | ||| ||||| ||||| |||| | |||||||| Sbjct 2566 AATAATAGAATAGGACTTTAG--TCTCCTTTGTTGGTTTGAGGGACTG-AAGTAATGATT 2622 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTATT 191 |||| ||||||| ||||| | |||||| |||||||| |||||||||||| |||||| || Sbjct 2623 AATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTCGGATTTGTT 2682 >seq20474 Length=5625 Score = 152 bits (168), Expect = 5e-35 Identities = 143/180 (79%), Gaps = 3/180 (2%) Strand=Plus/Minus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGG 71 |||||| |||| |||||||||| |||| | |||||| || |||||||||| ||||| Sbjct 5101 TTTTACCTTGAGAAAATTAGAGTGTTCCAGGCAGGCTCGCGCCGGAATACATTAGCATGG 5042 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||||||||||||| | | ||| ||||| ||||| |||| | |||||||| Sbjct 5041 AATAATAGAATAGGACTTTAG--TCTCCTTTGTTGGTTTGAGGGACTG-AAGTAATGATT 4985 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTATT 191 |||| ||||||| ||||| | |||||| |||||||| |||||||||||| |||||| || Sbjct 4984 AATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTCGGATTTGTT 4925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511889079520