Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000295675.1_202012-09-07] 22,363 sequences; 67,158,112 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq21323 219 8e-55 seq20474 219 8e-55 >seq21323 Length=7606 Score = 219 bits (242), Expect = 8e-55 Identities = 241/313 (77%), Gaps = 11/313 (4%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCT--TTGGCGGGTCGCCGGCTTCTT 77 || |||||||||| ||| |||| ||| | | ||| | || |||| || |||||| Sbjct 3081 GAACGAGACCTTAGCCTACTAACTAGTC-GATCCGTTGCTTAGCGGACA--CGACTTCTT 3137 Query 78 AGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 ||||||||| | | || | | ||||||||||||||||||||||||||||||||||| Sbjct 3138 AGAGGGACTTTGTGACTAAACACAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 3197 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 ||||||| |||||||||||||| ||||||||||| | || ||||| | || || | Sbjct 3198 TAGATGTCCTGGGCCGCACGCGTGCTACACTGACGCATACAGCGAGTACTTC-CCAGCTC 3256 Query 198 CGGAAGG--TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 || ||| || ||||||| || | |||||| |||||||||| | ||| |||| Sbjct 3257 CGTGAGGCAGCT-GGTAATC--AGCAATATGCGTCGTGATGGGGATAGATCTTTGGAATT 3313 Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 || | |||| |||||||||| |||||||||||| ||||| ||| ||| |||||| ||| Sbjct 3314 ATAGATCTTGAACGAGGAATTCCTAGTAAGCGCAAGTCATTAGCTTGCGCTGATTAAGTC 3373 Query 316 CCTGCCCTTTGTA 328 ||||||||||||| Sbjct 3374 CCTGCCCTTTGTA 3386 >seq20474 Length=5625 Score = 219 bits (242), Expect = 8e-55 Identities = 241/313 (77%), Gaps = 11/313 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCT--TTGGCGGGTCGCCGGCTTCTT 77 || |||||||||| ||| |||| ||| | | ||| | || |||| || |||||| Sbjct 4526 GAACGAGACCTTAGCCTACTAACTAGTC-GATCCGTTGCTTAGCGGACA--CGACTTCTT 4470 Query 78 AGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 ||||||||| | | || | | ||||||||||||||||||||||||||||||||||| Sbjct 4469 AGAGGGACTTTGTGACTAAACACAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 4410 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 ||||||| |||||||||||||| ||||||||||| | || ||||| | || || | Sbjct 4409 TAGATGTCCTGGGCCGCACGCGTGCTACACTGACGCATACAGCGAGTACTTC-CCAGCTC 4351 Query 198 CGGAAGG--TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 || ||| || ||||||| || | |||||| |||||||||| | ||| |||| Sbjct 4350 CGTGAGGCAGCT-GGTAATC--AGCAATATGCGTCGTGATGGGGATAGATCTTTGGAATT 4294 Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 || | |||| |||||||||| |||||||||||| ||||| ||| ||| |||||| ||| Sbjct 4293 ATAGATCTTGAACGAGGAATTCCTAGTAAGCGCAAGTCATTAGCTTGCGCTGATTAAGTC 4234 Query 316 CCTGCCCTTTGTA 328 ||||||||||||| Sbjct 4233 CCTGCCCTTTGTA 4221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946988177664