Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000711775.1_202014-06-25] 25,720 sequences; 496,291,018 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq21787 165 3e-38 seq11986 165 3e-38 seq20069 159 1e-36 seq8363 159 1e-36 seq24755 156 1e-35 seq21788 156 1e-35 seq6708 152 2e-34 seq20067 145 2e-32 seq5707 145 2e-32 seq21056 123 8e-26 seq20068 123 8e-26 seq7068 123 8e-26 seq20397 111 5e-22 >seq21787 Length=23618 Score = 165 bits (182), Expect = 3e-38 Identities = 91/91 (100%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16691 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 16750 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATT 524 ||||||||||||||||||||||||||||||| Sbjct 16751 GACATTCAGAGCACTGGGCAGAAATCACATT 16781 Score = 159 bits (176), Expect = 1e-36 Identities = 90/91 (99%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 22402 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTAAATTTCTTCACTTT 22461 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATT 524 ||||||||||||||||||||||||||||||| Sbjct 22462 GACATTCAGAGCACTGGGCAGAAATCACATT 22492 Score = 129 bits (142), Expect = 2e-27 Identities = 73/74 (99%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 368 GGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTT 427 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14655 GGACAGTGGGAACCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTT 14596 Query 428 GGCTACCTTAAGAG 441 |||||||||||||| Sbjct 14595 GGCTACCTTAAGAG 14582 >seq11986 Length=15771 Score = 165 bits (182), Expect = 3e-38 Identities = 91/91 (100%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 440 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 499 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATT 524 ||||||||||||||||||||||||||||||| Sbjct 500 GACATTCAGAGCACTGGGCAGAAATCACATT 530 >seq20069 Length=17632 Score = 159 bits (176), Expect = 1e-36 Identities = 90/91 (99%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14053 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 14112 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATT 524 || |||||||||||||||||||||||||||| Sbjct 14113 GATATTCAGAGCACTGGGCAGAAATCACATT 14143 Score = 123 bits (136), Expect = 8e-26 Identities = 85/96 (89%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| || ||||||||||| ||||| Sbjct 5464 CTTTTGGTCTACAAGAGATTTCTGTTCTCTTTGAGCTTACCCTAGGACACCTGTGTTATC 5523 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 102 |||||||||||||||||||||||||||||||||||| Sbjct 5524 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 5559 Score = 98.7 bits (108), Expect = 3e-18 Identities = 78/94 (83%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| || |||||||||||| |||| || | ||| ||||||||| Sbjct 17254 CTTTTATTCTACAAGAAATTTCTGTTCTCTTTGAGCTTACCCAAAAACATCTGCGTTATC 17195 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 |||||||||||||||||||||||||||||||||| Sbjct 17194 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 17161 >seq8363 Length=25497 Score = 159 bits (176), Expect = 1e-36 Identities = 90/91 (99%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15464 CTTAAGATAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 15523 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATT 524 ||||||||||||||||||||||||||||||| Sbjct 15524 GACATTCAGAGCACTGGGCAGAAATCACATT 15554 Score = 156 bits (172), Expect = 1e-35 Identities = 89/91 (98%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 20782 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGATTGGTTGAATTTCTTCACTTT 20841 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATT 524 ||||||||||||||||||||||||||| ||| Sbjct 20842 GACATTCAGAGCACTGGGCAGAAATCAAATT 20872 Score = 129 bits (142), Expect = 2e-27 Identities = 73/74 (99%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 368 GGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTT 427 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13435 GGACAGTGGGAACCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTT 13376 Query 428 GGCTACCTTAAGAG 441 |||||||||||||| Sbjct 13375 GGCTACCTTAAGAG 13362 >seq24755 Length=5763 Score = 156 bits (172), Expect = 1e-35 Identities = 89/91 (98%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 563 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGATTGGTTGAATTTCTTCACTTT 504 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATT 524 ||||||||||||||||||||||||||| ||| Sbjct 503 GACATTCAGAGCACTGGGCAGAAATCAAATT 473 >seq21788 Length=7206 Score = 156 bits (172), Expect = 1e-35 Identities = 89/91 (98%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1733 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGATTGGTTGAATTTCTTCACTTT 1792 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATT 524 ||||||||||||||||||||||||||| ||| Sbjct 1793 GACATTCAGAGCACTGGGCAGAAATCAAATT 1823 >seq6708 Length=15862 Score = 152 bits (168), Expect = 2e-34 Identities = 84/84 (100%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3549 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 3608 Query 501 AGAGCACTGGGCAGAAATCACATT 524 |||||||||||||||||||||||| Sbjct 3609 AGAGCACTGGGCAGAAATCACATT 3632 >seq20067 Length=43087 Score = 145 bits (160), Expect = 2e-32 Identities = 85/88 (97%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 264 CATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCG 323 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 25035 CATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTGTG 24976 Query 324 CCAAGCCCGTTCCCTTGGCTGTGGTTTC 351 |||||||||||||||||||||||| ||| Sbjct 24975 CCAAGCCCGTTCCCTTGGCTGTGGGTTC 24948 >seq5707 Length=12244 Score = 145 bits (160), Expect = 2e-32 Identities = 85/88 (97%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 264 CATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCG 323 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 7418 CATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTGTG 7477 Query 324 CCAAGCCCGTTCCCTTGGCTGTGGTTTC 351 |||||||||||||||||||||||| ||| Sbjct 7478 CCAAGCCCGTTCCCTTGGCTGTGGGTTC 7505 >seq21056 Length=11315 Score = 123 bits (136), Expect = 8e-26 Identities = 85/96 (89%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| || ||||||||||| ||||| Sbjct 9402 CTTTTGGTCTACAAGAGATTTCTGTTCTCTTTGAGCTTACCCTAGGACACCTGTGTTATC 9343 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 102 |||||||||||||||||||||||||||||||||||| Sbjct 9342 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 9307 >seq20068 Length=13123 Score = 123 bits (136), Expect = 8e-26 Identities = 85/96 (89%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| || ||||||||||| ||||| Sbjct 7159 CTTTTGGTCTACAAGAGATTTCTGTTCTCTTTGAGCTTACCCTAGGACACCTGTGTTATC 7218 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 102 |||||||||||||||||||||||||||||||||||| Sbjct 7219 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 7254 >seq7068 Length=21581 Score = 123 bits (136), Expect = 8e-26 Identities = 85/96 (89%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| || ||||||||||| ||||| Sbjct 8208 CTTTTGGTCTACAAGAGATTTCTGTTCTCTTTGAGCTTACCCTAGGACACCTGTGTTATC 8149 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 102 |||||||||||||||||||||||||||||||||||| Sbjct 8148 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 8113 >seq20397 Length=17476 Score = 111 bits (122), Expect = 5e-22 Identities = 82/96 (85%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| |||||||||||| | | || || ||| ||||||||||||| Sbjct 10546 CTTTTGGTCTACAAGAGATTTCTGTTTTATTTTAGCTTACCCTAGAACACCTGCGTTATC 10487 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 102 |||||||||||||||||||||||||||||||||||| Sbjct 10486 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 10451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634779426560