Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F001297925.1_202015-09-23] 22,458 sequences; 57,457,034 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2605 210 3e-52 >seq2605 Length=7581 Score = 210 bits (232), Expect = 3e-52 Identities = 191/233 (82%), Gaps = 7/233 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| ||| |||| |||||| |||||||||||||||| | Sbjct 3363 GTACAAAGGGCAGGGACTTAATCAGCGCAAGCTA-ATGACTTGCGCTTACTAGGAATT-C 3306 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 |||||| |||| | | |||| ||| |||||||||||||||||| | | ||| | |||| Sbjct 3305 CTCGTTCAAGATCTATAATTCCAAAGATCTATCCCCATCACGACGCATATTGCT--GATT 3248 Query 120 ACCCGGA-CCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||| | ||| ||| || || ||||| || || | |||||||||| ||||||| Sbjct 3247 ACCAGCTGCCTCACGGAGCTGG-GAAGTACTCGCTGTATGCGTCAGTGTAGCACGCGTGC 3189 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct 3188 GGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 3136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751836393470