Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F001297925.1_202015-09-23] 22,458 sequences; 57,457,034 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq2605 122 5e-26 >seq2605 Length=7581 Score = 122 bits (134), Expect = 5e-26 Identities = 100/120 (83%), Gaps = 10/120 (8%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACAT-CGCC 59 ||||||||||||||||||||||| ||||||||||| | | ||||| |||| Sbjct 2838 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGAAGGCG-------GATAAGGCGCGCC 2786 Query 60 --CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || Sbjct 2785 TCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTAGGACGGTATCTGATCGTCTTTGA 2726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278341384620