Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F001297925.1_202015-09-23] 22,458 sequences; 57,457,034 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2605 266 6e-69 >seq2605 Length=7581 Score = 266 bits (294), Expect = 6e-69 Identities = 208/246 (85%), Gaps = 3/246 (1%) Strand=Plus/Plus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132 |||||| |||| ||||||||||||||| | |||||| || |||||||||||||||| Sbjct 2482 TTTTACCTTGAGAAAATTAGAGTGTTCCAGGCAGGCTCGCGCCGGAATACATTAGCATGG 2541 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 |||||||||||||||| | | ||| ||||||||||| |||| | |||||||||| Sbjct 2542 AATAATAGAATAGGACTTTAG--TCTCCTTTGTTGGTTTGAGGGACTGAAGTAATGATTA 2599 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||||||||| ||||| | |||||| ||||||||||||||||||||| |||||| || Sbjct 2600 ATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTCGGATTTGTTA 2659 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 |||||||||| ||||||||| || |||||||||||||||||||||| |||||||||| Sbjct 2660 AAGACTAACTTATGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGT 2718 Query 313 TAGGGG 318 |||||| Sbjct 2719 TAGGGG 2724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914994464384