Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F001297925.1_202015-09-23] 22,458 sequences; 57,457,034 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2605 298 9e-79 >seq2605 Length=7581 Score = 298 bits (330), Expect = 9e-79 Identities = 225/260 (87%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| || | |||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 3221 TACTCGCTGTATGCGTCAGTGTAGCACGCGTGCGGCCCAGGACATCTAAGGGCATCACAG 3162 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG- 119 ||||||||||||||||||||||| ||| | | | | ||||||||||||||| | Sbjct 3161 ACCTGTTATTGCCTCAAACTTCC-TTGTGTTTAGTCACAAAGTCCCTCTAAGAAGTCGTG 3103 Query 120 -CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 || | || || | ||| | ||| |||| ||| ||||||||||||||||| |||||| Sbjct 3102 TCCGCTAAGCAACG--GATCGA-CTAGTTAGTAGGCTAAGGTCTCGTTCGTTAACGGAAT 3046 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3045 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 2986 Query 239 GAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||| Sbjct 2985 GAAAGAGCTATCAATCTGTC 2966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796626646698