Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F001297925.1_202015-09-23] 22,458 sequences; 57,457,034 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2605 358 1e-96 >seq2605 Length=7581 Score = 358 bits (396), Expect = 1e-96 Identities = 238/263 (90%), Gaps = 1/263 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 6994 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 6935 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||||||||||||| || ||| |||||||||||| ||||||||||||||||| Sbjct 6934 TTAGCGGGTGAACAATCCGACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 6875 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6874 CATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 6815 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||| || | | | |||||||||||||| Sbjct 6814 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAACTTTTAAAG-CAAAAGGATCGATAGG 6756 Query 271 CCACACTTTCATGGTTTGTATTC 293 ||| |||||| |||||||||| Sbjct 6755 CCATGCTTTCACAGTTTGTATTC 6733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854208118848