Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F001297925.1_202015-09-23] 22,458 sequences; 57,457,034 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2605 219 8e-55 >seq2605 Length=7581 Score = 219 bits (242), Expect = 8e-55 Identities = 241/313 (77%), Gaps = 11/313 (4%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCT--TTGGCGGGTCGCCGGCTTCTT 77 || |||||||||| ||| |||| ||| | | ||| | || |||| || |||||| Sbjct 3057 GAACGAGACCTTAGCCTACTAACTAGTC-GATCCGTTGCTTAGCGGACA--CGACTTCTT 3113 Query 78 AGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 ||||||||| | | || | | ||||||||||||||||||||||||||||||||||| Sbjct 3114 AGAGGGACTTTGTGACTAAACACAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 3173 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 ||||||| |||||||||||||| ||||||||||| | || ||||| | || || | Sbjct 3174 TAGATGTCCTGGGCCGCACGCGTGCTACACTGACGCATACAGCGAGTACTTC-CCAGCTC 3232 Query 198 CGGAAGG--TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 || ||| || ||||||| || | |||||| |||||||||| | ||| |||| Sbjct 3233 CGTGAGGCAGCT-GGTAATC--AGCAATATGCGTCGTGATGGGGATAGATCTTTGGAATT 3289 Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 || | |||| |||||||||| |||||||||||| ||||| ||| ||| |||||| ||| Sbjct 3290 ATAGATCTTGAACGAGGAATTCCTAGTAAGCGCAAGTCATTAGCTTGCGCTGATTAAGTC 3349 Query 316 CCTGCCCTTTGTA 328 ||||||||||||| Sbjct 3350 CCTGCCCTTTGTA 3362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946987277824