Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= AAMG01000026.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq1719 120 3e-25 >seq1719 Length=1442 Score = 120 bits (132), Expect = 3e-25 Identities = 149/199 (75%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| |||||| ||| | ||| Sbjct 1165 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTGGGCAACCGGAC 1106 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 ||||||| | ||||| |||| || | || |||| ||| || ||||| || Sbjct 1105 CTCGTTAGTTCAACTTAGAACGAATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCC 1046 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGC-ATGACTGATGCGCATT 179 |||||| | |||||||| |||||| ||||||| || |||| || |||| ||||| Sbjct 1045 TCTCGGCCTTGGACCTTAGCACCCAAAGCCTCACT-GC-CGGCTATATTTGAT-AGCATT 989 Query 180 CGGAGTTTGGCAGGACTTG 198 ||||||| | | ||| ||| Sbjct 988 CGGAGTTCGTCTGGATTTG 970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537587782032