Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2155 150 7e-34 >seq2155 Length=1067 Score = 150 bits (166), Expect = 7e-34 Identities = 110/128 (86%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615 ||||| || | |||||||||||||||||||||| || ||| ||||| |||||||| || Sbjct 1067 AGCATTTTTGGTAGGACCCGAAAGATGGTGAACTACGCTTGAGTAGGGCGAAGCCAGGGG 1008 Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675 ||||||||||||||||||| |||| | ||| ||||||||||| |||||||| ||| || | Sbjct 1007 AAACTCTGGTGGAGGCTCGAAGCGTTACTGACGTGCAAATCGTTCGTCAAACTTGAGTGT 948 Query 676 AGGGGCGA 683 |||||||| Sbjct 947 AGGGGCGA 940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079949678300