Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq1404 206 4e-51 >seq1404 Length=2053 Score = 206 bits (228), Expect = 4e-51 Identities = 201/253 (79%), Gaps = 8/253 (3%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| ||||||||||||||||| || ||||| || |||||| || || ||| Sbjct 98 TTAACCTTCCAGCACCGGGCAGGCGTCAGCCCATATACTTCCACTTAC-GTGTTTGCATA 156 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCT--- 118 ||||||||||||| |||||||||||| ||| || ||| |||||||| ||| ||||| Sbjct 157 GACCTGTGTTTTTGATAAACAGTCGCTACCCCCTTTTCACTGCGACCTCCAACAGCTTGA 216 Query 119 -CAACACGTCGT-TCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176 || || || | | |||| || ||| ||||||||||||||||||| ||| ||||| Sbjct 217 CCAGCAAGTGATCTTACCATCAAAGGCGTGCCTTCTCCCGAAGTTACGGCACCAATTTGC 276 Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGA-CCACCTGTG 235 || ||||||||| | ||||| ||| | ||||| || ||||||| ||| | | ||||||| Sbjct 277 AGAGTTCCTTAACAAGAGTTCTCCCAAGCGCCTGAGGATTCTCT-CCTCATCTACCTGTG 335 Query 236 TCGGTTTACGGTA 248 |||||||| |||| Sbjct 336 TCGGTTTATGGTA 348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694384218458