Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq822 89.7 6e-16 >seq822 Length=9602 Score = 89.7 bits (98), Expect = 6e-16 Identities = 87/116 (75%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 54 GCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNNNNNNNNNT 113 |||||||||| | | | |||||||| ||||| | | ||||||| | Sbjct 8571 GCATCTTCACAGCAAATTCAATTTCATAGAGCTGATATTGGAGACAGTAGGGCAGTCGTT 8512 Query 114 ACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACC 169 || ||||||||||||| ||||||||||||| ||||| |||| |||||||||||||| Sbjct 8511 ACTCCATTCGTGCAGGACGGAACTTACCCGTCAAGGGATTTTGCTACCTTAGGACC 8456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547187563854