Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq1681 203 6e-50 seq2180 192 1e-46 >seq1681 Length=1492 Score = 203 bits (224), Expect = 6e-50 Identities = 238/320 (74%), Gaps = 20/320 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||| ||||| |||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct 674 GGCGTTGCTGCGTCAGGGTTTCCCCCATTGCGCAATATTCCCCACTGCTGCCTCCCGTAG 615 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| |||| ||| ||| |||||||| |||| || || Sbjct 614 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGTCCGATCATCCTCTCAGACCGGATAGACAT 555 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||| ||| ||| | ||||||||| ||||| |||| |||||||| | Sbjct 554 CGTCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATGTCCCGCAGGCCCATCTAATA 495 Query 181 GCG-----ATA---------AATCTTT-GGTCAAAG-AATGATGCCATCCTCTGACATTA 224 ||| ||| | ||||| || || | | || | || | || Sbjct 494 GCGAATGCATATACAGAGGCATTCTTTCAAGCACAGTCTTAAAACCGTGCTTCG----TA 439 Query 225 TGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTG 284 ||||| |||||| |||| |||||||| |||| |||||||||| | ||||| Sbjct 438 TGCGGCATTAGCCAAAATTTCTTCTGGTTATTCCCCTCTAAAAGGCAGGTCACCTACGTG 379 Query 285 TTACTCACCCGTCCGCCACT 304 |||||||||||| ||||||| Sbjct 378 TTACTCACCCGTGCGCCACT 359 >seq2180 Length=1048 Score = 192 bits (212), Expect = 1e-46 Identities = 214/286 (75%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 16 GGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGT 75 || || | ||||||| |||||| || |||||||||||||||||||||||||| |||||| Sbjct 1048 GGCTTGCGCCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGT 989 Query 76 CTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGG 135 |||||| ||| ||||| | || |||||||| | ||||| ||| ||| |||||| | Sbjct 988 CTCAGTACCAGTGTGGGGGATCTCCCTCTCAGGACCCCTACCCATCATCGCCTTGGTAAG 929 Query 136 CTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTTTGG 195 | ||| || |||||||| ||||| || ||| || |||||| || |||||||||||| Sbjct 928 CCGTTACCTTACCAACTAGCTAATGGGACGCATGCTCATCTTCCACCGATAAATCTTTAA 869 Query 196 TCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGTTAT 255 ||| || ||||||||||| ||| ||| || |||| |||| | ||| Sbjct 868 TCACAGGATGATGCCATCTCGTGATGCTATAAGGCATTAATCCAAATTTCTCTGGGCTAT 809 Query 256 TCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCC 301 ||| | || ||||||| |||| ||| ||||| ||||||| |||| Sbjct 808 TCCTTTGTGGAAGGCAGATTGCATACGCGTTACGCACCCGTGCGCC 763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998376577536