Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= AAMG01001449.1 Length=395 Score E Sequences producing significant alignments: (Bits) Value seq1490 201 3e-49 >seq1490 Length=1831 Score = 201 bits (222), Expect = 3e-49 Identities = 288/402 (72%), Gaps = 18/402 (4%) Strand=Plus/Minus Query 3 ACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGCCT 62 ||||| ||| |||||||| |||||| ||||| ||||| || ||||||||||| |||| Sbjct 540 ACGGCGGCGGGCCGGTGTGGTCGGGCGGGCTGTTTCCGTTTCTATTCATCACCATCGCCT 481 Query 63 GTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCTCG 122 | || ||||| ||||| || || ||||||||| || ||||||||||||||| || ||| Sbjct 480 GCGGGGCGGTGTCGGGCTTTCACGCGCTGATCGCCAGCGGCACCACGCCCAAGCTGATCG 421 Query 123 CCAGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGTGG 182 | ||| | | || | | |||||| || |||| |||||| ||| ||||||||| Sbjct 420 CATCCGAGGCCGACGCGCCCTTCATCGGCTATGGCGCGATGCTGGCCGAGGCGTTCGTGG 361 Query 183 CCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGAACA 242 | ||||||||| |||| | ||| || | || ||||| ||| | || ||| ||||||||| Sbjct 360 CGATCATGGCGCTGGTGGGCGCATCCATCATCGAGCCGGGCATCTATTTCACCATGAACA 301 Query 243 GCCCGGCTGCCATTGTCGGCACCGACGTGGTCACCGTGGCGCAAACCGTCAGCAGT---- 298 |||| || || | |||||||| ||| ||| | || | || | || || Sbjct 300 GCCCCGCCGCTCTGATCGGCACC-ACG------CCGGAGAGCGCATCGGCGGCGGTGTCG 248 Query 299 ---TGGGGCTTTGCCATTACGCCTGAGGCGCT-GTCGGCCGTTG-CCCACAATATCGGTG 353 |||||||||||| ||||| ||||| | || || || || | | || || | Sbjct 247 GCCATGGGCTTTGCCATCACGCCCGAGGCCATCGT--GCAACTGACCAAGGACATTGGCG 190 Query 354 AAACCACCATCCTGGCACGTGCCGGCGGCGCGCCGACTCTGG 395 || ||| ||||| |||| ||||||||||||| || |||| Sbjct 189 AACACACGATCCTCTCACGCACCGGCGGCGCGCCCACGCTGG 148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1161572748864