Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq1230 114 3e-23 >seq1230 Length=2633 Score = 114 bits (126), Expect = 3e-23 Identities = 270/401 (67%), Gaps = 14/401 (3%) Strand=Plus/Plus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 ||||||||||||| ||||| ||||||| |||||| ||||| || || ||| ||||| | Sbjct 523 CGATGGTCAGCAATTCGCCACCCACCTCGGTCCAGGCCAGACCCGTCACCGCACCGATCT 582 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120 ||| | || || | || ||| | || ||||||||| || ||| || | ||||| Sbjct 583 GATTTTCCTCGTCCGACACGCCATGGCGGAATTTGCGGACACCGGCAAAATCGGCCAGGT 642 Query 121 AGTCGGCCGTGACCTTCACCGAGAAGCGTTT---TTCCAGCGCATGTTCCTTGACCGC-C 176 |||| ||||| |||| | || |||||| || || | | || | Sbjct 643 TTTCGGGCGTGATGGTCACGCTCCTGTCCTTGCCTTCCAGA--ATCTTGC--GCAGGCTC 698 Query 177 TTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAG 236 ||||| | | ||| | | |||||||| |||||| || || ||||||||||| Sbjct 699 TTGCGCGCCAGCCGCGCCACTTCACGCTCCAGTGTACGCACGCCCGCCTCGCGGGTGTAA 758 Query 237 TAGCGGACGATGTCGCGGATCGTGCCGACT---TCAAATTCGATCTCGCCCTTCTTCAGG 293 ||||||| | ||||| | | || | || ||| | || |||||||||||||| Sbjct 759 TAGCGGATCAGATCGCGCA--GCGCGGGCTGGGTCAGGGT-GAACTCGCCCTTCTTCAAC 815 Query 294 CCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCT 353 |||| ||| |||||||||| | | || | |||||| | || ||||||||| Sbjct 816 CCATGCGCCTCGATCTGCTTGGCCACCAGATGGCGTTCGGCGATCTCGACCTTCTCGTCC 875 Query 354 TCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 || || || ||| ||| || || | ||||| |||||||| Sbjct 876 TCAGTATAGCCCTCCAGACGGATGATCTCCATGCGGTCCAG 916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158372823936