Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq1243 84.2 6e-14 >seq1243 Length=2574 Score = 84.2 bits (92), Expect = 6e-14 Identities = 171/253 (68%), Gaps = 6/253 (2%) Strand=Plus/Minus Query 129 TGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCACG 188 ||||||||| |||||| | || | ||| | ||| || || |||||| |||||| Sbjct 932 TGAACCTTGCGGATGAAATGCTTGATCATTTCTTCGGCGATTTCGATGTCGGCAATCACG 873 Query 189 CCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCTTG 248 ||||| || ||| || ||||| | || || | || || ||| | ||| |||| Sbjct 872 CCGTCGCGCAGCGGGCGGATGGCCTCGATGCTGTCCGGGGTCTTGCCCATCATCATCTTG 813 Query 249 GCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGG---GTCCGAATGGCCACA 305 || || ||| ||||| ||| | ||| || |||| | ||| |||||||| Sbjct 812 GCATCATCGCCCACGGCCTTGACGC---TCTTGTTGCCATTGATCGTCTCGATGGCCACC 756 Query 306 ACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCAGTG 365 || ||||| ||||| ||||| || || || |||| || | ||| || ||||| ||| Sbjct 755 ACGCTGGGCTCGTTCAGCACGATTCCCCGGTCCTGCACATAGACAAGCGTATTGGCCGTG 696 Query 366 CCCAGGTCAATGG 378 || ||||| |||| Sbjct 695 CCGAGGTCGATGG 683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353568244544