Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq1384 93.3 4e-17 seq1681 77.0 3e-12 >seq1384 Length=2115 Score = 93.3 bits (102), Expect = 4e-17 Identities = 116/158 (73%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||||| | ||||| ||| || |||| || |||| || | | || Sbjct 593 TCGAGTTGCAGACCCCGATCCGAACTGTGAACGGCTTTTTGAGATTGGCACGATATTGCT 534 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | || |||||||||| |||||||| ||||||| ||||| | ||||||||| Sbjct 533 ATCTAGCTGCCCTCTGTACCGTCCATTGTAGCACGTGTGTAGCCCCGGACGTAAGGGCCA 474 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTG 157 ||| ||||||||||| ||||| |||||||| | ||||| Sbjct 473 TGATGACTTGACGTCGTCCCCTCCTTCCTCTCTGTTTG 436 >seq1681 Length=1492 Score = 77.0 bits (84), Expect = 3e-12 Identities = 46/47 (98%), Gaps = 1/47 (2%) Strand=Plus/Minus Query 110 CATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCC-GGTT 155 |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1491 CATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCTGGTT 1445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415990545620