Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq1681 244 2e-62 >seq1681 Length=1492 Score = 244 bits (270), Expect = 2e-62 Identities = 223/279 (80%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACT-GTCCAGCAATCCGCCTTCGCCACTGGTG 59 ||||||||||||||||||||||||| | ||| |||||| || |||||||||| |||||| Sbjct 1049 CCCACGCTTTCGCGCCTCAGCGTCAAT-ACTCGTCCAGGAAGGCGCCTTCGCCTCTGGTG 991 Query 60 TTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCA 119 |||| || ||||||||| |||| ||| ||||| || ||||| || || |||| | Sbjct 990 TTCCATCGCATATCTACGGATTTTACCCCTACATGCGATATTCCCCTTCCCCCTCCGAGA 931 Query 120 CTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGAC 179 || ||| ||||||| | |||| | |||||||||| || ||||||||||||| Sbjct 930 TTCTAGACCTGTAGTTTCAGACGCAGTTTCGAGGTTGAGCCCCGAGATTTCACATCTGAC 871 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 |||| |||||||| ||| |||||| ||||||||||||| | ||||||||| ||| | Sbjct 870 TTGCAGGTCCGCCTACGCGCGCTTTACGCCCAATAAATCCGAACAACGCTTGCACCCTTC 811 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||||||||||||||||||||||| ||||||||| |||| Sbjct 810 GTATTACCGCGGCTGCTGGCACGAAGTTAGCCGGTGCTT 772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828781163966