Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq2052 244 2e-62 seq1384 150 3e-34 seq1719 143 5e-32 seq1404 140 6e-31 >seq2052 Length=1134 Score = 244 bits (270), Expect = 2e-62 Identities = 206/251 (82%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| ||||||||||||||||||| | |||||| ||||||||| |||| ||||| | Sbjct 583 AGAGCATGTGGTGGATGCCTTGGCGATGATAGGCGACGAAGGACGTGATAGCCTGCGAAA 524 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| ||||| |||||||||| |||| ||||||||||||||||| Sbjct 523 AGCTTCGGGGAGCTGGCAAATTAGCTTTGATCCGGAGATATCCGAATGGGGAAACCCA-- 466 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180 || ||| || ||||| ||||||||||| |||| | |||||| || |||||||||| Sbjct 465 CCGAAAGGT-ATCGCATGATGAATACATAGTCATGCGAGGCGAACCGGGTGAACTGAAAC 407 Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAAT 240 |||| ||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct 406 ATCTCAGTAGCTCGAGGAAAAGACATCAACCGAGATTCCGAAAGTAGTGGCGAGCGAAAT 347 Query 241 GGGATGAGCCT 251 ||| ||||| Sbjct 346 CGGAGAAGCCT 336 >seq1384 Length=2115 Score = 150 bits (166), Expect = 3e-34 Identities = 188/252 (75%), Gaps = 13/252 (5%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || || ||||| |||||||| ||| | | |||||| ||||||||| || ||||||| Sbjct 1280 AGGGCGCATGGGGGATGCCTAGGCTCTCAGAGGCGAAGAAGGACGTGATAAGCTGCGATA 1339 Query 61 AGCTGCGGGGAGTGAGCAAACA--CACTTTGATCCGCAGATTTCCGAATGGGGAAACCCG 118 |||| ||||||| | ||| ||| |||| | ||||| |||||||||||||||| |||||| Sbjct 1340 AGCTTCGGGGAGCG-GCACACACGCACTAT-ATCCGAAGATTTCCGAATGGGGCAACCCG 1397 Query 119 GCCCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAA 178 || ||| | |||| || |||| ||| || ||| || |||||||| Sbjct 1398 GCATGTTG----AAGACATGTCACATCGATAG--ATG---GGCAAACCCGCTGAACTGAA 1448 Query 179 ACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 |||||||||||| | |||| |||||| ||| | |||||| ||||||||||||||||| Sbjct 1449 ACATCTAAGTAGGCGGAGGAGAAGAAAACAAAAGTGATTCCGTAAGTAGTGGCGAGCGAA 1508 Query 239 ATGGGATGAGCC 250 |||| |||| Sbjct 1509 CGCGGATTAGCC 1520 >seq1719 Length=1442 Score = 143 bits (158), Expect = 5e-32 Identities = 183/252 (73%), Gaps = 19/252 (8%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||||| || |||||||| ||| | | |||||| ||||||||| || ||||||| Sbjct 64 AGGGCACACGGGGGATGCCTAGGCTCTCAGAGGCGAAGAAGGACGTGATAAGCTGCGATA 123 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||| || ||||| | ||||||| |||||||||||||||| |||| | | Sbjct 124 AGCTTTGGGGATTG-GCAAATGCGACTTGATCCAGAGATTTCCGAATGGGGCAACCTGAC 182 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAG--GTATGCAAAGCGAACGCGGCGAACTGAA 178 |||| || | |||| |||| || ||||||||| |||||||| Sbjct 183 TATTTG---------------AAGA-ATAGTCGTATAAAACGCGAACGCGCTGAACTGAA 226 Query 179 ACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 |||||||||||| | |||| |||||| ||| |||| || ||||||||||||||||| Sbjct 227 ACATCTAAGTAGGCGTAGGAGAAGAAAATAACAATGATTTCCCAAGTAGTGGCGAGCGAA 286 Query 239 ATGGGATGAGCC 250 || | ||||| Sbjct 287 CGGGAAAGAGCC 298 >seq1404 Length=2053 Score = 140 bits (154), Expect = 6e-31 Identities = 199/274 (73%), Gaps = 12/274 (4%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAG--TAGCTTGCGATAAGCTG 65 |||| | || |||||| | |||||| |||||||||| |||| |||| | || Sbjct 1963 ATGGGGAATATCTTGGCAGCAAGAGGCGAAGAAGGACGTATATTAGCCAGCGAAATGCAT 1904 Query 66 CGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTT 125 |||||||| ||||| | ||||||||||| ||| |||||||||||||||| | || Sbjct 1903 CGGGGAGTCGGCAAATAGACTTTGATCCGGTGATGTCCGAATGGGGAAACCTTCACACTT 1844 Query 126 GGGTCATTG-----CATGC--TGAATACA-TAGGTATGCAA-AGCGAACGCGGCGAACTG 176 | | || |||| ||| || | ||| || | ||||||||| | ||| || Sbjct 1843 GAAAGAGTGTGAACCATGTAATGAGTAAACTAGTTACATAGGAGCGAACGCAGGGAATTG 1784 Query 177 AAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCG 236 |||||||| |||| ||||||||| || |||||| ||||||||| ||||| |||||||| Sbjct 1783 AAACATCTTAGTACCTGCAGGAAGAGTAATCAAACGAGATTCCGGCAGTAGCGGCGAGCG 1724 Query 237 AAATGGGATGAGCCTTTACGAG-ATAGTTGAATT 269 |||| ||| ||||| || || ||| ||| ||| Sbjct 1723 AAATCGGAAGAGCCCAAACCAGAATACTTGTATT 1690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918378454336