Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1404 127 7e-27 seq822 114 4e-23 >seq1404 Length=2053 Score = 127 bits (140), Expect = 7e-27 Identities = 116/148 (78%), Gaps = 10/148 (7%) Strand=Plus/Plus Query 416 ACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGG 475 ||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 1 ACCCGACTAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGG 60 Query 476 CTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGC 535 |||||||| || | | | || | | || |||| ||||||||||||| Sbjct 61 CTTCAATT----------CAAAGCTTCTCTTGCGATAACCTCTCCTTTTAACCTTCCAGC 110 Query 536 ACCGGGCAGGCGTCAGTCCGTATACCTC 563 |||||||||||||||| || ||||| || Sbjct 111 ACCGGGCAGGCGTCAGCCCATATACTTC 138 >seq822 Length=9602 Score = 114 bits (126), Expect = 4e-23 Identities = 90/108 (83%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 ||||||| |||| ||||||||| ||||||||||||| ||||||||||||| ||||| ||| Sbjct 8531 GAGACAGTAGGGCAGTCGTTACTCCATTCGTGCAGGACGGAACTTACCCGTCAAGGGATT 8472 Query 431 TCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 | |||||||||||| | | ||||| |||||||||| || |||| Sbjct 8471 TTGCTACCTTAGGACCATCAGAGTTATGGCCGCCGTTTATTGCTGCTT 8424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702360061696