Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq2180 210 5e-52 seq1681 156 9e-36 >seq2180 Length=1048 Score = 210 bits (232), Expect = 5e-52 Identities = 176/216 (81%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201 || |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 1042 CGCCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGT 983 Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261 ||| ||||||||| || |||||||| ||||||| ||||| | | || ||| ||||||| Sbjct 982 ACCAGTGTGGGGGATCTCCCTCTCAGGACCCCTACCCATCATCGCCTTGGTAAGCCGTTA 923 Query 262 CCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCGATGAATCTTTAATGATGA 321 || || |||| ||||||| |||||| | |||| | ||||||| |||||||||| | Sbjct 922 CCTTACCAACTAGCTAATGGGACGCATGCTCATCTTCCACCGATAAATCTTTAATCACAG 863 Query 322 TACCATGCAATCTCATCATACCATCAGGTATTAATC 357 | |||| ||||| | || | || ||| ||||||| Sbjct 862 GATGATGCCATCTCGTGATGCTATAAGGCATTAATC 827 >seq1681 Length=1492 Score = 156 bits (172), Expect = 9e-36 Identities = 165/216 (76%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 80 TAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACT 139 ||| ||| |||||| ||| || ||||| || |||||| | | |||| |||| | Sbjct 714 TAACAGAGCTTTACAGACCGAAGT-CCTTCCTCACTCACGCGGCGTTGCTGCGTCAGGGT 656 Query 140 CTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCA 199 || |||||| ||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct 655 TTCCCCCATTGCGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCA 596 Query 200 GTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGT 259 |||||| |||| || | |||||||||| | || |||||| | || ||| |||| | Sbjct 595 GTTCCAGTGTGTCCGATCATCCTCTCAGACCGGATAGACATCGTCGCCTTGGTAGGCCTT 536 Query 260 TACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 |||||| || |||| |||||| |||| |||||| Sbjct 535 TACCCCACCAACTAGCTAATGTCCCGCAGGCCCATC 500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068774925952