Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq711 132 1e-26 >seq711 Length=17244 Score = 132 bits (146), Expect = 1e-26 Identities = 206/292 (71%), Gaps = 2/292 (1%) Strand=Plus/Plus Query 37772 GGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTGCTT 37831 || ||||| | || || || |||||| ||||| | || || ||||||||| ||||| Sbjct 9670 GGTTTTCCTTTGGTAACGACCAAAAAAGTGCATTTAAAGTCTATTATTTATGAATTGCTT 9729 Query 37832 TGGTTTTTAAAAGGCGATACGAACGTCCGCTAT-TTGCAGGAGAATGGCGTGACGATTTG 37890 |||||| ||||||||||||| ||| || ||| || || || ||||| || | ||||| Sbjct 9730 TGGTTTCTAAAAGGCGATACAAACATCAAATATCTTACA-GATAATGGTGTTTCCATTTG 9788 Query 37891 GGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGCTC 37950 | |||| ||||| |||||||| || |||| || || ||||||| || |||||| | | Sbjct 9789 GAATGAATGGGCAGACGAAAATGGAAATCTTGGTCCAGTTTACGGAGCACAATGGAGAAC 9848 Query 37951 GTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGATCAA 38010 ||| | || ||| || ||| | ||||| |||| | ||| || || | ||||| Sbjct 9849 TTGGGAAGGCAAAGATGGAAAAGTGGTAGACCAAATCGTAGAGGTAGTAGAGCAAATCAA 9908 Query 38011 ACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAA 38062 |||||| |||| | | || | || |||||||||| ||| ||| Sbjct 9909 GAAAAATCCTGATTCTAGAAGACTTATCGTTTCTGCTTGGAATGCAGCCGAA 9960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130636360532900