Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq701 120 3e-22 seq805 91.5 2e-13 >seq701 Length=18236 Score = 120 bits (132), Expect = 3e-22 Identities = 396/599 (66%), Gaps = 39/599 (7%) Strand=Plus/Plus Query 146810 GATGAAGTCTATCAATTTGCTGCAGACATGGGTGGCGCAGGTTACATCTTTACTGATGAA 146869 ||||| || |||||||| ||||| || ||||| || ||||| || || ||||| | || Sbjct 6466 GATGAGGTTTATCAATTAGCTGCTGATATGGGAGGAGCAGGATATATTTTTACAGGAGAT 6525 Query 146870 CACTCTGCAGACATCATGCATAATTCTGCCACAATCAATCTAAATCTTTTGGATGCGATT 146929 | |||| | | |||||||| || || || || |||||| | | ||| | | Sbjct 6526 AATGATGCAAATGTTATGCATAACTCGGCGCTCATTAACCTAAATGTAGTACATG--AAT 6583 Query 146930 GTGAAGACCAAAGGTATGGGACGTAAAGTTCCTAAGATT-TTCTATTCATCTTCTGCTTG 146988 ||| | | ||| || ||||| |||| | |||||||| || |||||||| Sbjct 6584 GTGCAAA--AAA--TA----ACGTAGG------AAGAGTATTCTATTCTTCATCTGCTTG 6629 Query 146989 CATTTATCCTTCT-ACAATCCAAGAAGATACGGATAATCCTGGTTTGCGTGAAGAG---T 147044 || ||||| | |||| | ||||| | ||||||| | ||||||| | Sbjct 6630 TATGTATCCAGAGCATAATC-AGCAAGATCCTAATAATCCAAACT---GTGAAGAAAGTT 6685 Query 147045 ATGCATATCCAGCTAACCCAGACTCTGAATATGGATGGGAAAAACTTTTCTCTGAAAGAC 147104 ||| || || || || || || ||||||||||| |||||||||||||| || ||| | | Sbjct 6686 CTGCTTACCCTGCAAATCCGGATTCTGAATATGGTTGGGAAAAACTTTTTTCAGAACGTC 6745 Query 147105 TTTATCTTGCATACGGGCGTAACTACAATCTGGATATTAGGATTGCTCGTTACCATAACA 147164 ||||| | || | | | ||||| || | | | || | || | | |||||| | Sbjct 6746 TTTATTTAGCTTTCAATAGAAACTATAAGTTAAACGTAAGAGTAGCAAGATTCCATAATA 6805 Query 147165 TTTATGGACCTGA---AGGAACCTGGGACGGTGGAAAGGAGAAAGCTCCCGCAGCTATGT 147221 ||| || ||| ||||| |||| ||||| || || || || || ||||| |||| Sbjct 6806 TTTTCGG---TGAGTTTGGAACATGGGTGGGTGGTAAAGAAAAGGCACCAGCAGCAATGT 6862 Query 147222 GTCGAAAGGTTGCGTCCATCTTGGGTGATTCGGGAGAAGTTGAATGTTGGGGTGATGGAG 147281 || |||| | ||| | | || | || | || | ||| |||||| |||||| Sbjct 6863 GTAGAAAAGCTGCAGAAACAGAAGATGGT--GGCACAA-TAGAAGTTTGGGGAGATGGAC 6919 Query 147282 AACAAACTCGATCATTCTTGTACATCGATGATTGCATCGAAGCTACACGACGTTTAATGG 147341 | ||||| || || |||||| | | |||| || | ||||| || | || || | Sbjct 6920 AGCAAACGCGTTCTTTCTTGCATGTAAATGAATGTGTAGAAGCAGTACTTAGATTGAT-G 6978 Query 147342 AGAGTA-ATTATGTC-GAGGTC--ATCAACATCGGTTCAGAGGAGATGGTATCCATCAA 147396 ||| | || || || ||| | | |||||||||||||| || |||||| ||||||| Sbjct 6979 AGACAAGATGATTTCTTAGGGCCTGTAAACATCGGTTCAGAAGAAATGGTAACCATCAA 7037 >seq805 Length=10423 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 145598 TACTTTAATCTTTAGTGCTGCACAAGCTATCCTCGCTGCAAAAGCTGGTGCAACTTACGT 145657 ||||||||| ||| ||||| |||||| | || ||||||||||||||||| |||||||| Sbjct 5305 TACTTTAATTTTTTCTGCTGGACAAGCGCTTCTTGCTGCAAAAGCTGGTGCTACTTACGT 5246 Query 145658 TTCTCCCTTTGTTGGAAGACTTGACGATAATTCTA 145692 |||||| || | |||||| | || ||| ||||| Sbjct 5245 TTCTCCTTTCTTAGGAAGATTAGATGATGTTTCTA 5211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559311597706400