Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20caudatum_20[genbank_20GCA_5F000715435.1_202014-06-30] 777 sequences; 30,480,878 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq361 143 6e-32 >seq361 Length=1580 Score = 143 bits (158), Expect = 6e-32 Identities = 246/354 (69%), Gaps = 20/354 (6%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| || ||| |||||||| || || | |||||||| | ||||| Sbjct 941 GCATCTTCACAGGAATTTCAATTTCATAAAGCTGATATTGGAGACAGTAGGGCAGTCGTT 1000 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || || ||||||| || ||||||||||||| ||||| |||| |||||||||||||| | | Sbjct 1001 ACTCCATTCGTGCAGGACGGAACTTACCCGTCAAGGGATTTTGCTACCTTAGGACCATCA 1060 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC-AGATC 185 ||||| |||||||||||| || ||||| || | || || ||||| | Sbjct 1061 GAGTTATGGCCGCCGTTTATTGCTGCTTA--TT------ATTAATAGCGCTAACTATTAA 1112 Query 186 CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCA 245 | || | | || ||||||||||| ||||| | |||||||| | | | || ||| Sbjct 1113 ACTTTTGCATGACAACACCGGGCAGGAGTCAGATTTTATACATCATAATTAAATTTTGCA 1172 Query 246 GAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG-AC 304 || | | ||||||| ||||||||||||| | ||| | | | || | Sbjct 1173 AAATCTTATGTTTTTAGTAAACAGTCGCTACCCTCCATTTT--------TTTAATTGCTT 1224 Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATA 358 | |||| || |||| ||||||| || ||||||||||||||||| ||||| Sbjct 1225 AAGCACTTTTTATCCCGAAGTTACAAAGTAATTTTGCCGAGTTCCTT--CAATA 1276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062391745152