Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20caudatum_20[genbank_20GCA_5F000715435.1_202014-06-30] 777 sequences; 30,480,878 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq361 136 6e-30 >seq361 Length=1580 Score = 136 bits (150), Expect = 6e-30 Identities = 146/191 (76%), Gaps = 8/191 (4%) Strand=Plus/Plus Query 89 ACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATT----T 144 |||||||| | || | | ||||||||||||||| | || | ||||||||| | Sbjct 321 ACCAGAGGCTAGTTCTACTCGGTCCTCTCGTACT---GGCATCGA-TCTCAAATTCATTT 376 Query 145 CCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGT 204 | | | || || |||||||||| ||||||||| | ||||| | |||||||||| ||| Sbjct 377 CTTTTTTCTACAACAGATAGGGACCAAACTGTCTCACAACGTTTTAAACCCAGCTCACGT 436 Query 205 GCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACG 264 || ||||||| ||||||||||| ||||||||| | | || || | |||||||| || | Sbjct 437 ACCACTTTAATTGGCGAACAGCCAAACCCTTGGCAGATTCTGCACCACCAGGATGTGATG 496 Query 265 AGCCGACATCG 275 ||||||||||| Sbjct 497 AGCCGACATCG 507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780794122772