Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= AAMG01000026.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq236 118 1e-24 >seq236 Length=1941 Score = 118 bits (130), Expect = 1e-24 Identities = 148/201 (74%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| ||||| || || ||| Sbjct 1243 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCCGTGCAGTCCGAC 1184 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 ||||||| ||| | | |||| || | || | | |||||| || || || Sbjct 1183 TTCGTTAATGCAACTGAGCATGTATTTGGGGACCTTAGCCGGTGGTCCGGGTTGTTGCCC 1124 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATG--CGCAT 178 |||||| | ||||||||| ||||| ||||||||| | | ||||| | || | ||| Sbjct 1123 TCTCGGACGCGGACCTTAGCACCCGCGCCCTCACT--CCCTGCATGGAAGTTGCACCCAT 1066 Query 179 TCGGAGTTTGGCAGGACTTGA 199 |||||||||| | |||||||| Sbjct 1065 TCGGAGTTTGTCTGGACTTGA 1045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537597172056