Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq236 194 2e-47 >seq236 Length=1941 Score = 194 bits (214), Expect = 2e-47 Identities = 148/174 (85%), Gaps = 7/174 (4%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 ||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||| Sbjct 1756 AAACGGACACACGTAGTTGGGTTGAGTATACTAAGGCGCTCGAGTGAATCACGGTTAAGG 1815 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGG 144 || |||||||| |||||| ||||||||||||||| |||| || | | || ||| Sbjct 1816 AATTAGGCAAAATGACCCCGTAACTTCGGGATAAGGGGTGCCCGC------TTCGGCGGG 1869 Query 145 -CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAAT 197 ||||||||||||| |||||||||||||||||||||||| |||| ||| ||| Sbjct 1870 CCGCAGAGAATAGGGGAAGGCAACTGTTTAACAAAAACACATGGCTATGCTAAT 1923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531197205722